| EST name | EST sequence |
| gi|238193997|gb|GR061643.1|GR061643 | AGCGCCTAAAGATGAAGATGATTATGATTAGAGAAAGGAAAATATCTTTAGAAGATAAACTAGTAGAGTACATAAACAAC AATCCCATCACAGCAGCAGACTAATTTTTCATTTCTTTTTTTCCTACTCCAGAAAATACCCCATTACAAAAAGAAAAAAA AAAGATATACCATTAAACAAAAGGAAGGGAAACTATTTATCATCATAAAAGGGTAAACATAGTTGCGAGGGGATGGATTA CATAATTTCATAAGCTTCCATTTTTCATCTTCACTCGTCGTCGTCGTCATCATCATCATCGGCGCTGCCGTCCTCGTCAT CATCGTCGTCTTCGTCATCGTTCACTTCCGACCTTGACTTGTCGGACTCCTCTTCTGTGGGCCCATCGCTCAATTTTTTG TTGTAAGCCTGAAGGGTTTTTTCATACTCGCCCTTTCGCTTCTCAGCCTTGGCTATGTAAGGAGCTTTTTCAGCTTCTGT GAGAGATTTCCACTTGTCACCACCAGCTTTCCCAACAGCGGCGACTGATTTGTTGTTTGGGTGCTTCTCTTTGTACGTTT TCCTGAAGTCTCTCCATGAAGACGAAGAAAGCA |
Most similar to sp|P40619|HMGL_IPONI
>BLASTX 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>sp|Q9LVC9|RLA32_ARATH 60S acidic ribosomal protein P3-2
OS=Arabidopsis thaliana GN=RPP3B PE=1 SV=1
Length = 120
Score = 79.3 bits (194), Expect(2) = 2e-26
Identities = 37/38 (97%), Positives = 37/38 (97%)
Frame = +1
Query: 58 MGVFSFVCKSKGGEWTAKQHEGDLEASASSTYDLQRXL 171
MGVFSFVCKSKGGEWTAKQHEGDLEASASSTYDLQR L
Sbjct: 1 MGVFSFVCKSKGGEWTAKQHEGDLEASASSTYDLQRKL 38
Score = 58.9 bits (141), Expect(2) = 2e-26
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = +3
Query: 171 VQTALSADSSGGVQSSFSLVSPTSAVFVVVI 263
VQTALSADSSGGVQSSFSLVSPTSAVFVVVI
Sbjct: 39 VQTALSADSSGGVQSSFSLVSPTSAVFVVVI 69
>sp|Q9SVZ6|RLA31_ARATH 60S acidic ribosomal protein P3-1
OS=Arabidopsis thaliana GN=RPP3A PE=1 SV=1
Length = 119
Score = 66.6 bits (161), Expect(2) = 1e-20
Identities = 29/41 (70%), Positives = 37/41 (90%)
Frame = +1
Query: 58 MGVFSFVCKSKGGEWTAKQHEGDLEASASSTYDLQRXLFRL 180
MGVF+FVCK+ GG W+AKQHEG+LE+SASSTY+LQR L ++
Sbjct: 1 MGVFTFVCKNGGGAWSAKQHEGELESSASSTYELQRKLVQV 41
Score = 52.8 bits (125), Expect(2) = 1e-20
Identities = 26/31 (83%), Positives = 29/31 (93%)
Frame = +3
Query: 171 VQTALSADSSGGVQSSFSLVSPTSAVFVVVI 263
VQ +LSADSSGGVQSSFSLVSPTSAVF V++
Sbjct: 39 VQVSLSADSSGGVQSSFSLVSPTSAVFQVIV 69
BLASTX 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>sp|P40619|HMGL_IPONI HMG1/2-like protein OS=Ipomoea nil PE=2 SV=1
Length = 144
Score = 129 bits (325), Expect = 1e-29
Identities = 65/78 (83%), Positives = 68/78 (87%), Gaps = 1/78 (1%)
Frame = -3
Query: 570 DFRKTYKEKHPNNKSVAAVGKAGGDKWKSLTEAEKAPYIAKAEKRKGEYEKTLQAYNKKL 391
DFRKTYKEKHPNNKSVA VGKAGGDKWK LT AEKAP+I+KAEKRK EYEK LQAYNKK
Sbjct: 49 DFRKTYKEKHPNNKSVAVVGKAGGDKWKQLTAAEKAPFISKAEKRKQEYEKNLQAYNKKQ 108
Query: 390 SDGPT-EEESDKSRSEVN 340
+ G EEESDKSRSEVN
Sbjct: 109 AAGAAEEEESDKSRSEVN 126